Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
HFM1A2PYH4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC22.37■■□□□ 1.17
HFM1A2PYH4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC22.37■■□□□ 1.17
HFM1A2PYH4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC22.37■■□□□ 1.17
HFM1A2PYH4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC22.37■■□□□ 1.17
HFM1A2PYH4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC22.37■■□□□ 1.17
HFM1A2PYH4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC22.37■■□□□ 1.17
HFM1A2PYH4 AC009955.4-201ENST00000597192 544 ntBASIC22.37■■□□□ 1.17
HFM1A2PYH4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC22.37■■□□□ 1.17
HFM1A2PYH4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC22.37■■□□□ 1.17
HFM1A2PYH4 AC002472.3-201ENST00000640124 621 ntBASIC22.37■■□□□ 1.17
HFM1A2PYH4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HFM1A2PYH4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HFM1A2PYH4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HFM1A2PYH4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HFM1A2PYH4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HFM1A2PYH4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
HFM1A2PYH4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
HFM1A2PYH4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HFM1A2PYH4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HFM1A2PYH4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 AL008638.5-201ENST00000623814 1298 ntBASIC22.36■■□□□ 1.17
HFM1A2PYH4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HFM1A2PYH4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC22.36■■□□□ 1.17
HFM1A2PYH4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC22.35■■□□□ 1.17
HFM1A2PYH4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC22.35■■□□□ 1.17
HFM1A2PYH4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
HFM1A2PYH4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HFM1A2PYH4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
HFM1A2PYH4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HFM1A2PYH4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HFM1A2PYH4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HFM1A2PYH4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC22.35■■□□□ 1.17
HFM1A2PYH4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
HFM1A2PYH4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HFM1A2PYH4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC22.35■■□□□ 1.17
HFM1A2PYH4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HFM1A2PYH4 BCYRN1-201ENST00000418539 200 ntBASIC22.35■■□□□ 1.17
HFM1A2PYH4 AC099548.2-209ENST00000480264 625 ntBASIC22.35■■□□□ 1.17
HFM1A2PYH4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC22.35■■□□□ 1.17
HFM1A2PYH4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC22.35■■□□□ 1.17
HFM1A2PYH4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
HFM1A2PYH4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HFM1A2PYH4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HFM1A2PYH4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HFM1A2PYH4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
HFM1A2PYH4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HFM1A2PYH4 TCAF2P1-201ENST00000291129 2421 ntBASIC22.35■■□□□ 1.17
HFM1A2PYH4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HFM1A2PYH4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HFM1A2PYH4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HFM1A2PYH4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 AC100850.1-201ENST00000506768 649 ntBASIC22.34■■□□□ 1.17
HFM1A2PYH4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 AC005730.2-201ENST00000564549 1184 ntBASIC22.34■■□□□ 1.17
HFM1A2PYH4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 AC244093.1-201ENST00000610837 814 ntBASIC22.34■■□□□ 1.17
HFM1A2PYH4 AC244157.2-201ENST00000616239 1006 ntBASIC22.34■■□□□ 1.17
HFM1A2PYH4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HFM1A2PYH4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC22.34■■□□□ 1.17
HFM1A2PYH4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms