Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC022145.2-201ENST00000598203 171 ntBASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF103-CHMP3A0A140T963 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC015656.1-201ENST00000624209 3578 ntBASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC005237.2-201ENST00000434368 219 ntBASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 EEF1DP4-201ENST00000446006 880 ntBASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC148477.4-201ENST00000613430 1793 ntBASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC127383.1-201ENST00000444697 1800 ntBASIC14.92□□□□□ -0.02
RNF103-CHMP3A0A140T963 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms