Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 AL450487.1-201ENST00000426799 995 ntBASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 KRT8P48-201ENST00000515599 1220 ntBASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 IGHV3-62-201ENST00000520057 340 ntBASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 LINC01225-203ENST00000563550 1244 ntBASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 FAM58CP-201ENST00000435741 640 ntBASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 SPDYE11-202ENST00000450699 704 ntBASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 AC079140.1-201ENST00000508039 487 ntBASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 FAM86C2P-203ENST00000528684 1004 ntBASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 SPDYE9P-201ENST00000570642 692 ntBASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 SPDYE10P-202ENST00000612005 668 ntBASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 SPDYE8P-202ENST00000612377 668 ntBASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 AC092902.6-201ENST00000641783 218 ntBASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms