Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.91■□□□□ 0.14
HCFC2Q9Y5Z7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 RPL17P11-201ENST00000417593 544 ntBASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 AC234782.1-201ENST00000451950 919 ntBASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 AC100827.2-201ENST00000563214 1194 ntBASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 AC009955.4-201ENST00000597192 544 ntBASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 AC090164.2-201ENST00000611487 516 ntBASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC2Q9Y5Z7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 TNRC18P3-201ENST00000441896 2691 ntBASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 RN7SKP175-201ENST00000408472 289 ntBASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 AC069218.1-201ENST00000435269 762 ntBASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 AC006335.1-201ENST00000445200 547 ntBASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 AC008267.1-201ENST00000474858 1069 ntBASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 AL136295.7-201ENST00000619226 1200 ntBASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 AC002472.3-201ENST00000640124 621 ntBASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HCFC2Q9Y5Z7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC2Q9Y5Z7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HCFC2Q9Y5Z7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC2Q9Y5Z7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC2Q9Y5Z7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.88■□□□□ 0.13
HCFC2Q9Y5Z7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.88■□□□□ 0.13
HCFC2Q9Y5Z7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms