Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 AC007326.2-201ENST00000624224 7579 ntBASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 RPS20P25-201ENST00000412447 352 ntBASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 BASP1P1-201ENST00000430708 665 ntBASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 AC022144.1-201ENST00000602255 1580 ntBASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
VPS9D1Q9Y2B5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 ZBED1P1-201ENST00000502364 1930 ntBASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 AGAP7P-201ENST00000582299 2062 ntBASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 AGAP14-201ENST00000624701 2060 ntBASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 AC012508.2-201ENST00000567613 1472 ntBASIC15.4■□□□□ 0.06
VPS9D1Q9Y2B5 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms