Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL390955.2-201ENST00000603032 514 ntBASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 KRT8P44-201ENST00000441609 1350 ntBASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 REXO1L2P-201ENST00000425429 2069 ntBASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 AC015656.1-201ENST00000624209 3578 ntBASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 AC126365.1-201ENST00000578585 1514 ntBASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 AC140479.7-201ENST00000636301 2332 ntBASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 AC114501.2-201ENST00000439631 535 ntBASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 AC005498.2-205ENST00000593218 784 ntBASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 AC022144.1-201ENST00000602255 1580 ntBASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAPPC4Q9Y296 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 TOMM22P5-201ENST00000416399 439 ntBASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 RPL13P2-201ENST00000440687 659 ntBASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 AC093214.1-201ENST00000511688 1107 ntBASIC14.16□□□□□ -0.14
TRAPPC4Q9Y296 SLED1-202ENST00000512051 380 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms