Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 AC006001.1-201ENST00000325130 474 ntBASIC14.75□□□□□ -0.05
LHX6Q9UPM6 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 FO393414.2-201ENST00000405153 598 ntBASIC14.75□□□□□ -0.05
LHX6Q9UPM6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 AC126915.1-201ENST00000522847 1038 ntBASIC14.75□□□□□ -0.05
LHX6Q9UPM6 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 AC120045.2-201ENST00000567334 178 ntBASIC14.75□□□□□ -0.05
LHX6Q9UPM6 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 GNRHR2-203ENST00000581100 1187 ntBASIC14.75□□□□□ -0.05
LHX6Q9UPM6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 LINC01115-203ENST00000606068 577 ntBASIC14.75□□□□□ -0.05
LHX6Q9UPM6 AP000346.4-201ENST00000614827 381 ntBASIC14.75□□□□□ -0.05
LHX6Q9UPM6 AC138951.2-201ENST00000623455 1161 ntBASIC14.75□□□□□ -0.05
LHX6Q9UPM6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.75□□□□□ -0.05
LHX6Q9UPM6 AC018735.1-201ENST00000437208 1502 ntBASIC14.75□□□□□ -0.05
LHX6Q9UPM6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.75□□□□□ -0.05
LHX6Q9UPM6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 AL645728.1-201ENST00000366221 2101 ntBASIC14.74□□□□□ -0.05
LHX6Q9UPM6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 AL031731.1-201ENST00000642131 2094 ntBASIC14.74□□□□□ -0.05
LHX6Q9UPM6 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 AC034187.1-201ENST00000437047 561 ntTSL 4 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 AL162385.1-201ENST00000451595 1202 ntTSL 2 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 TYW3-205ENST00000479111 1130 ntTSL 3 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 AP001527.2-201ENST00000614441 631 ntBASIC14.74□□□□□ -0.05
LHX6Q9UPM6 AC145423.3-201ENST00000615987 467 ntBASIC14.74□□□□□ -0.05
LHX6Q9UPM6 AC012653.2-201ENST00000621880 420 ntBASIC14.74□□□□□ -0.05
LHX6Q9UPM6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LHX6Q9UPM6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms