Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 AC144831.1-201ENST00000573312 2656 ntBASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 FAM86LP-201ENST00000478302 853 ntBASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 AC190387.1-201ENST00000551683 408 ntBASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 AC140912.1-201ENST00000577171 1054 ntBASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 AC087481.3-201ENST00000602886 1894 ntBASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 AC020658.6-201ENST00000623564 1870 ntBASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PARPBPQ9NWS1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
PARPBPQ9NWS1 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.83□□□□□ -0.19
PARPBPQ9NWS1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PARPBPQ9NWS1 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
PARPBPQ9NWS1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PARPBPQ9NWS1 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PARPBPQ9NWS1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 AL358472.5-202ENST00000641448 1267 ntBASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PARPBPQ9NWS1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms