Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 MYO15B-237ENST00000642007 4893 ntBASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 TCAF2P1-201ENST00000291129 2421 ntBASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 MIR661-201ENST00000384842 89 ntBASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 AC236430.1-201ENST00000402231 743 ntBASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 PIN1P1-201ENST00000412108 996 ntBASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 SAMD11P1-201ENST00000571429 661 ntBASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 AC093813.1-201ENST00000605066 256 ntBASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 AL662799.1-202ENST00000614205 422 ntBASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 AGAP7P-201ENST00000582299 2062 ntBASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 AGAP14-201ENST00000624701 2060 ntBASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBQLN4Q9NRR5 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 AC134915.1-201ENST00000426461 574 ntBASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 AL442647.2-201ENST00000429864 857 ntBASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 VDAC1P7-201ENST00000462417 847 ntBASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 TERF1P3-201ENST00000505638 1227 ntBASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms