Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 AC134407.2-201ENST00000625089 1978 ntBASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
C12orf4Q9NQ89 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 FAAHP1-202ENST00000446499 1238 ntBASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C12orf4Q9NQ89 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 AL390755.1-201ENST00000623716 2027 ntBASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 MBLAC2-202ENST00000514906 1936 ntBASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 WASH6P-202ENST00000359512 1437 ntBASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 AC004870.1-201ENST00000315132 882 ntBASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 AC079781.3-201ENST00000449110 356 ntBASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms