Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 MIR3687-1-201ENST00000614492 61 ntBASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 AP001059.3-201ENST00000619053 235 ntBASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 AC023141.5-201ENST00000458585 616 ntBASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 AL512356.2-201ENST00000546955 174 ntBASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 CICP14-201ENST00000629111 2732 ntBASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 GRK6P1-201ENST00000400595 1711 ntBASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.29□□□□□ -0.12
POLR2J3Q9H1A7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 INTS4P1-203ENST00000641008 3683 ntBASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms