Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.55□□□□□ -0.24
SLIRPQ9GZT3 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.55□□□□□ -0.24
SLIRPQ9GZT3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLIRPQ9GZT3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLIRPQ9GZT3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLIRPQ9GZT3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
SLIRPQ9GZT3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SLIRPQ9GZT3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLIRPQ9GZT3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 CICP16-201ENST00000502609 2813 ntBASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 AL607033.1-201ENST00000623900 1599 ntBASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 MIR600HG-201ENST00000449175 5984 ntBASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 AC104819.1-201ENST00000504587 486 ntBASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 AP002414.4-201ENST00000589764 1148 ntBASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 AC008667.4-201ENST00000607370 168 ntBASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLIRPQ9GZT3 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 AC136604.1-201ENST00000418535 575 ntBASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 PRYP6-201ENST00000514804 343 ntBASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 SART3-203ENST00000546611 1184 ntBASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 AC006557.2-201ENST00000592985 1240 ntBASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 AC099336.1-202ENST00000602961 463 ntBASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 AC012617.1-204ENST00000586340 2305 ntBASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.53□□□□□ -0.24
SLIRPQ9GZT3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms