Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 AC125807.1-201ENST00000483097 614 ntBASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 IGHV3-62-201ENST00000520057 340 ntBASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 AL009183.1-201ENST00000603760 355 ntBASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 AL589702.1-201ENST00000641229 1509 ntBASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 AC140479.7-201ENST00000636301 2332 ntBASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM55Q9BYV6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 MIR661-201ENST00000384842 89 ntBASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 AC107890.1-201ENST00000422478 521 ntBASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 UGT1A2P-201ENST00000454886 866 ntBASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 AC190387.1-201ENST00000551683 408 ntBASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 LINC01225-203ENST00000563550 1244 ntBASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 AC026150.2-201ENST00000564693 1156 ntBASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 AC018892.3-201ENST00000623986 2499 ntBASIC15.65■□□□□ 0.1
TRIM55Q9BYV6 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.64■□□□□ 0.1
TRIM55Q9BYV6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.64■□□□□ 0.1
TRIM55Q9BYV6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 FO538757.1-201ENST00000623083 1397 ntBASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 C8orf49-201ENST00000525043 1968 ntBASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRIM55Q9BYV6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms