Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFAF3Q9BU61 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 BX640514.1-201ENST00000583223 1918 ntBASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 AGAP7P-201ENST00000582299 2062 ntBASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 AGAP14-201ENST00000624701 2060 ntBASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 KRT18P2-201ENST00000447938 1258 ntBASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 AC018845.2-201ENST00000568326 409 ntBASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NDUFAF3Q9BU61 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
NDUFAF3Q9BU61 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
NDUFAF3Q9BU61 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.02□□□□□ -0.48
NDUFAF3Q9BU61 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NDUFAF3Q9BU61 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NDUFAF3Q9BU61 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
NDUFAF3Q9BU61 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.02□□□□□ -0.48
NDUFAF3Q9BU61 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
NDUFAF3Q9BU61 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NDUFAF3Q9BU61 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.02□□□□□ -0.48
NDUFAF3Q9BU61 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.02□□□□□ -0.48
NDUFAF3Q9BU61 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NDUFAF3Q9BU61 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.02□□□□□ -0.48
NDUFAF3Q9BU61 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
NDUFAF3Q9BU61 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
NDUFAF3Q9BU61 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 AC096734.2-201ENST00000562054 433 ntBASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 SNHG9-202ENST00000564014 471 ntBASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 AC023141.13-201ENST00000604991 943 ntBASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms