Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
HDHD3Q9BSH5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 ELL2P1-201ENST00000413990 1906 ntBASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 SBF1P1-201ENST00000444527 5631 ntBASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 FO393414.2-201ENST00000405153 598 ntBASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 SPDYE17-201ENST00000412399 783 ntBASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 GHSR-202ENST00000427970 912 ntBASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 KRT18P64-201ENST00000434946 1219 ntBASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 AC093520.2-201ENST00000561830 333 ntBASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HDHD3Q9BSH5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 AL627223.1-201ENST00000416693 442 ntBASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 GPS2P2-201ENST00000430745 888 ntBASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 RBPMS2P1-201ENST00000437762 623 ntBASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 KRT18P58-201ENST00000527480 1120 ntBASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HDHD3Q9BSH5 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms