Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
VGLL1Q99990 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
VGLL1Q99990 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 RDX-218ENST00000544551 4117 ntTSL 2 BASIC11.75□□□□□ -0.53
VGLL1Q99990 AC005912.2-201ENST00000619492 2400 ntBASIC11.75□□□□□ -0.53
VGLL1Q99990 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
VGLL1Q99990 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
VGLL1Q99990 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.75□□□□□ -0.53
VGLL1Q99990 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
VGLL1Q99990 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
VGLL1Q99990 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
VGLL1Q99990 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.75□□□□□ -0.53
VGLL1Q99990 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.75□□□□□ -0.53
VGLL1Q99990 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.75□□□□□ -0.53
VGLL1Q99990 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.75□□□□□ -0.53
VGLL1Q99990 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.75□□□□□ -0.53
VGLL1Q99990 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
VGLL1Q99990 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.75□□□□□ -0.53
VGLL1Q99990 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC11.75□□□□□ -0.53
VGLL1Q99990 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC11.75□□□□□ -0.53
VGLL1Q99990 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.75□□□□□ -0.53
VGLL1Q99990 RARRES2P9-201ENST00000565168 469 ntBASIC11.75□□□□□ -0.53
VGLL1Q99990 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.75□□□□□ -0.53
VGLL1Q99990 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.75□□□□□ -0.53
VGLL1Q99990 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VGLL1Q99990 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.75□□□□□ -0.53
VGLL1Q99990 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.75□□□□□ -0.53
VGLL1Q99990 AC084364.1-201ENST00000551967 1556 ntBASIC11.75□□□□□ -0.53
VGLL1Q99990 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.75□□□□□ -0.53
VGLL1Q99990 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
VGLL1Q99990 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VGLL1Q99990 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.74□□□□□ -0.53
VGLL1Q99990 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VGLL1Q99990 INTS4P1-203ENST00000641008 3683 ntBASIC11.74□□□□□ -0.53
VGLL1Q99990 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 TEX30-205ENST00000376029 959 ntTSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 RPL5P21-201ENST00000404620 815 ntBASIC11.74□□□□□ -0.53
VGLL1Q99990 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.74□□□□□ -0.53
VGLL1Q99990 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 AL592309.1-201ENST00000443127 649 ntBASIC11.74□□□□□ -0.53
VGLL1Q99990 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC11.74□□□□□ -0.53
VGLL1Q99990 AC069335.1-201ENST00000489972 472 ntBASIC11.74□□□□□ -0.53
VGLL1Q99990 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.74□□□□□ -0.53
VGLL1Q99990 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.74□□□□□ -0.53
VGLL1Q99990 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC11.74□□□□□ -0.53
VGLL1Q99990 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.74□□□□□ -0.53
VGLL1Q99990 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.74□□□□□ -0.53
VGLL1Q99990 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.74□□□□□ -0.53
VGLL1Q99990 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 WASH3P-207ENST00000560956 1394 ntBASIC11.74□□□□□ -0.53
VGLL1Q99990 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VGLL1Q99990 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 FO538757.1-201ENST00000623083 1397 ntBASIC11.74□□□□□ -0.53
VGLL1Q99990 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VGLL1Q99990 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms