Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.27□□□□□ -0.29
GFI1Q99684 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.27□□□□□ -0.29
GFI1Q99684 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.27□□□□□ -0.29
GFI1Q99684 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.27□□□□□ -0.29
GFI1Q99684 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 RNA5SP416-201ENST00000516838 111 ntBASIC13.27□□□□□ -0.29
GFI1Q99684 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.27□□□□□ -0.29
GFI1Q99684 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
GFI1Q99684 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.27□□□□□ -0.29
GFI1Q99684 AC140113.2-201ENST00000604370 208 ntBASIC13.27□□□□□ -0.29
GFI1Q99684 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.27□□□□□ -0.29
GFI1Q99684 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.27□□□□□ -0.29
GFI1Q99684 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.27□□□□□ -0.29
GFI1Q99684 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
GFI1Q99684 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.27□□□□□ -0.29
GFI1Q99684 AL359881.3-201ENST00000602640 1721 ntBASIC13.27□□□□□ -0.29
GFI1Q99684 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 AC023090.2-201ENST00000625182 2110 ntBASIC13.27□□□□□ -0.29
GFI1Q99684 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
GFI1Q99684 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
GFI1Q99684 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GFI1Q99684 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
GFI1Q99684 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
GFI1Q99684 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
GFI1Q99684 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
GFI1Q99684 AL133267.1-201ENST00000398220 340 ntBASIC13.26□□□□□ -0.29
GFI1Q99684 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 AL450487.1-201ENST00000426799 995 ntBASIC13.26□□□□□ -0.29
GFI1Q99684 AL353705.2-201ENST00000428243 662 ntBASIC13.26□□□□□ -0.29
GFI1Q99684 AL354702.1-201ENST00000442006 1960 ntBASIC13.26□□□□□ -0.29
GFI1Q99684 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 KRT8P12-202ENST00000472924 1397 ntBASIC13.26□□□□□ -0.29
GFI1Q99684 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
GFI1Q99684 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.26□□□□□ -0.29
GFI1Q99684 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.26□□□□□ -0.29
GFI1Q99684 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.26□□□□□ -0.29
GFI1Q99684 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
GFI1Q99684 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GFI1Q99684 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GFI1Q99684 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GFI1Q99684 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.25□□□□□ -0.29
GFI1Q99684 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GFI1Q99684 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GFI1Q99684 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GFI1Q99684 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.25□□□□□ -0.29
GFI1Q99684 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
GFI1Q99684 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
GFI1Q99684 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GFI1Q99684 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GFI1Q99684 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.25□□□□□ -0.29
GFI1Q99684 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GFI1Q99684 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.25□□□□□ -0.29
GFI1Q99684 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GFI1Q99684 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
GFI1Q99684 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
GFI1Q99684 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GFI1Q99684 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms