Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NOTCH4Q99466 AL157791.1-201ENST00000553667 1699 ntBASIC15.53■□□□□ 0.08
NOTCH4Q99466 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.53■□□□□ 0.08
NOTCH4Q99466 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH4Q99466 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH4Q99466 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.53■□□□□ 0.08
NOTCH4Q99466 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH4Q99466 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.53■□□□□ 0.08
NOTCH4Q99466 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH4Q99466 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.53■□□□□ 0.08
NOTCH4Q99466 AL132994.2-201ENST00000603120 687 ntBASIC15.53■□□□□ 0.08
NOTCH4Q99466 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.53■□□□□ 0.08
NOTCH4Q99466 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH4Q99466 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.53■□□□□ 0.08
NOTCH4Q99466 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.53■□□□□ 0.08
NOTCH4Q99466 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH4Q99466 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH4Q99466 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH4Q99466 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH4Q99466 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH4Q99466 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NOTCH4Q99466 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.52■□□□□ 0.08
NOTCH4Q99466 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.52■□□□□ 0.08
NOTCH4Q99466 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NOTCH4Q99466 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NOTCH4Q99466 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NOTCH4Q99466 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NOTCH4Q99466 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NOTCH4Q99466 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.52■□□□□ 0.08
NOTCH4Q99466 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NOTCH4Q99466 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NOTCH4Q99466 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NOTCH4Q99466 FAM58BP-201ENST00000439056 645 ntBASIC15.52■□□□□ 0.08
NOTCH4Q99466 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.52■□□□□ 0.08
NOTCH4Q99466 PRKXP1-201ENST00000561423 1122 ntBASIC15.52■□□□□ 0.08
NOTCH4Q99466 AC008805.1-201ENST00000590892 364 ntBASIC15.52■□□□□ 0.08
NOTCH4Q99466 AL157813.1-201ENST00000612996 587 ntBASIC15.52■□□□□ 0.08
NOTCH4Q99466 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NOTCH4Q99466 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.52■□□□□ 0.07
NOTCH4Q99466 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NOTCH4Q99466 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
NOTCH4Q99466 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.52■□□□□ 0.07
NOTCH4Q99466 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
NOTCH4Q99466 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NOTCH4Q99466 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NOTCH4Q99466 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.52■□□□□ 0.07
NOTCH4Q99466 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.52■□□□□ 0.07
NOTCH4Q99466 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NOTCH4Q99466 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NOTCH4Q99466 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NOTCH4Q99466 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.52■□□□□ 0.07
NOTCH4Q99466 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 Z97180.1-201ENST00000445173 988 ntBASIC15.51■□□□□ 0.07
NOTCH4Q99466 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.51■□□□□ 0.07
NOTCH4Q99466 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH4Q99466 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NOTCH4Q99466 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NOTCH4Q99466 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
NOTCH4Q99466 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NOTCH4Q99466 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NOTCH4Q99466 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NOTCH4Q99466 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms