Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 AC012073.1-201ENST00000606114 1108 ntBASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 AC107464.3-201ENST00000609172 737 ntBASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CSMD1Q96PZ7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.83□□□□□ -0.35
CSMD1Q96PZ7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CSMD1Q96PZ7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CSMD1Q96PZ7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.83□□□□□ -0.35
CSMD1Q96PZ7 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 KRT8P21-201ENST00000430398 1491 ntBASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSMD1Q96PZ7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 MIR3677-201ENST00000578964 60 ntBASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 PEBP1P2-201ENST00000603980 558 ntBASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 KRT8P14-201ENST00000414254 1442 ntBASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 AC144831.1-201ENST00000573312 2656 ntBASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 CICP13-201ENST00000422015 2789 ntBASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 AC114812.1-204ENST00000449669 728 ntBASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 AC020910.5-201ENST00000623668 1865 ntBASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 AL627422.1-201ENST00000434104 580 ntBASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 PMEL-214ENST00000550447 901 ntTSL 3 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 DUT-207ENST00000559416 635 ntTSL 2 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSMD1Q96PZ7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms