Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 BRI3BPP1-201ENST00000594224 787 ntBASIC18.21■□□□□ 0.51
NEK1Q96PY6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 AC013726.1-201ENST00000563747 2285 ntBASIC18.21■□□□□ 0.51
NEK1Q96PY6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 AC007787.1-201ENST00000588095 1583 ntBASIC18.21■□□□□ 0.51
NEK1Q96PY6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
NEK1Q96PY6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
NEK1Q96PY6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 AL138799.1-201ENST00000448213 1675 ntBASIC18.2■□□□□ 0.5
NEK1Q96PY6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 DFFBP1-201ENST00000433250 979 ntBASIC18.2■□□□□ 0.5
NEK1Q96PY6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 LINC02560-201ENST00000596379 459 ntBASIC18.2■□□□□ 0.5
NEK1Q96PY6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 CICP23-201ENST00000605013 2741 ntBASIC18.2■□□□□ 0.5
NEK1Q96PY6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NEK1Q96PY6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.2■□□□□ 0.5
NEK1Q96PY6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NEK1Q96PY6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
NEK1Q96PY6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.19■□□□□ 0.5
NEK1Q96PY6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.19■□□□□ 0.5
NEK1Q96PY6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.19■□□□□ 0.5
NEK1Q96PY6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.19■□□□□ 0.5
NEK1Q96PY6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 FAM207CP-201ENST00000443486 507 ntBASIC18.19■□□□□ 0.5
NEK1Q96PY6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.19■□□□□ 0.5
NEK1Q96PY6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NEK1Q96PY6 RN7SL204P-201ENST00000582831 262 ntBASIC18.19■□□□□ 0.5
NEK1Q96PY6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms