Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 TSSK5P-201ENST00000423978 907 ntBASIC16.3■□□□□ 0.2
TRIM11Q96F44 METTL21AP1-201ENST00000438852 635 ntBASIC16.3■□□□□ 0.2
TRIM11Q96F44 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 SAMD11P1-201ENST00000571429 661 ntBASIC16.3■□□□□ 0.2
TRIM11Q96F44 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 AL158212.4-201ENST00000624062 1286 ntBASIC16.3■□□□□ 0.2
TRIM11Q96F44 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TRIM11Q96F44 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM11Q96F44 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM11Q96F44 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM11Q96F44 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM11Q96F44 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM11Q96F44 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM11Q96F44 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM11Q96F44 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM11Q96F44 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM11Q96F44 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM11Q96F44 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM11Q96F44 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 AC004066.1-201ENST00000502488 802 ntBASIC16.29■□□□□ 0.2
TRIM11Q96F44 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM11Q96F44 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM11Q96F44 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM11Q96F44 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM11Q96F44 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM11Q96F44 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms