Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 AL136379.1-201ENST00000623471 2642 ntBASIC15.65■□□□□ 0.1
RTP4Q96DX8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 MTHFR-210ENST00000641407 2387 ntBASIC15.65■□□□□ 0.1
RTP4Q96DX8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 AC018529.2-202ENST00000611482 3087 ntBASIC15.65■□□□□ 0.1
RTP4Q96DX8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 AC026748.1-201ENST00000624349 3251 ntBASIC15.65■□□□□ 0.1
RTP4Q96DX8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 AL353779.1-201ENST00000434793 351 ntBASIC15.65■□□□□ 0.1
RTP4Q96DX8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 AC135586.1-201ENST00000539323 574 ntBASIC15.65■□□□□ 0.1
RTP4Q96DX8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.65■□□□□ 0.1
RTP4Q96DX8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTP4Q96DX8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTP4Q96DX8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTP4Q96DX8 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RTP4Q96DX8 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTP4Q96DX8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RTP4Q96DX8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RTP4Q96DX8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.64■□□□□ 0.09
RTP4Q96DX8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTP4Q96DX8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTP4Q96DX8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RTP4Q96DX8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTP4Q96DX8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTP4Q96DX8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTP4Q96DX8 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RTP4Q96DX8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
RTP4Q96DX8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RTP4Q96DX8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.64■□□□□ 0.09
RTP4Q96DX8 AL645937.2-201ENST00000396808 931 ntBASIC15.64■□□□□ 0.09
RTP4Q96DX8 PIN1P1-201ENST00000412108 996 ntBASIC15.64■□□□□ 0.09
RTP4Q96DX8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.64■□□□□ 0.09
RTP4Q96DX8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RTP4Q96DX8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.64■□□□□ 0.09
RTP4Q96DX8 HLA-K-203ENST00000430151 1046 ntBASIC15.64■□□□□ 0.09
RTP4Q96DX8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.64■□□□□ 0.09
RTP4Q96DX8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.64■□□□□ 0.09
RTP4Q96DX8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.64■□□□□ 0.09
RTP4Q96DX8 AP005018.1-201ENST00000525475 301 ntBASIC15.64■□□□□ 0.09
RTP4Q96DX8 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.64■□□□□ 0.09
RTP4Q96DX8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.64■□□□□ 0.09
RTP4Q96DX8 RARRES2P5-201ENST00000564013 466 ntBASIC15.64■□□□□ 0.09
RTP4Q96DX8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.64■□□□□ 0.09
RTP4Q96DX8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTP4Q96DX8 AC004790.1-201ENST00000612686 536 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms