Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 MIR4313-201ENST00000580760 101 ntBASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 CTBP2P3-201ENST00000585629 1255 ntBASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 MIR8072-201ENST00000614241 80 ntBASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 AP002414.2-201ENST00000591780 3365 ntBASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 OR2I1P-210ENST00000642037 4691 ntBASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 AL607033.1-201ENST00000623900 1599 ntBASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.32■□□□□ 0.04
SH3KBP1Q96B97 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 AL442647.2-201ENST00000429864 857 ntBASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 AL391069.4-201ENST00000609583 481 ntBASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 PPT1-215ENST00000641471 2368 ntBASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3KBP1Q96B97 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 OR8S1-201ENST00000310194 1080 ntBASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms