Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.38■□□□□ 0.21
SHC3Q92529 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.38■□□□□ 0.21
SHC3Q92529 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.38■□□□□ 0.21
SHC3Q92529 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 AC098850.1-201ENST00000419919 790 ntBASIC16.38■□□□□ 0.21
SHC3Q92529 AL442647.2-201ENST00000429864 857 ntBASIC16.38■□□□□ 0.21
SHC3Q92529 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.38■□□□□ 0.21
SHC3Q92529 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.38■□□□□ 0.21
SHC3Q92529 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.38■□□□□ 0.21
SHC3Q92529 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.38■□□□□ 0.21
SHC3Q92529 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.38■□□□□ 0.21
SHC3Q92529 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SHC3Q92529 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
SHC3Q92529 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.38■□□□□ 0.21
SHC3Q92529 CICP14-201ENST00000629111 2732 ntBASIC16.38■□□□□ 0.21
SHC3Q92529 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 AL391825.1-201ENST00000457671 1364 ntBASIC16.38■□□□□ 0.21
SHC3Q92529 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC3Q92529 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SHC3Q92529 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.37■□□□□ 0.21
SHC3Q92529 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.37■□□□□ 0.21
SHC3Q92529 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SHC3Q92529 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SHC3Q92529 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.37■□□□□ 0.21
SHC3Q92529 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.37■□□□□ 0.21
SHC3Q92529 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.37■□□□□ 0.21
SHC3Q92529 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.37■□□□□ 0.21
SHC3Q92529 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.37■□□□□ 0.21
SHC3Q92529 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 AC092552.1-201ENST00000547243 906 ntBASIC16.37■□□□□ 0.21
SHC3Q92529 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.37■□□□□ 0.21
SHC3Q92529 AC124283.3-201ENST00000570869 594 ntBASIC16.37■□□□□ 0.21
SHC3Q92529 AL132655.2-201ENST00000596276 594 ntBASIC16.37■□□□□ 0.21
SHC3Q92529 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SHC3Q92529 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 PRSS30P-206ENST00000641773 873 ntBASIC16.37■□□□□ 0.21
SHC3Q92529 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.37■□□□□ 0.21
SHC3Q92529 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SHC3Q92529 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.37■□□□□ 0.21
SHC3Q92529 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.37■□□□□ 0.21
SHC3Q92529 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.37■□□□□ 0.21
SHC3Q92529 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SHC3Q92529 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 FAM45BP-202ENST00000592932 1624 ntBASIC16.37■□□□□ 0.21
SHC3Q92529 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC3Q92529 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.37■□□□□ 0.21
SHC3Q92529 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SHC3Q92529 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SHC3Q92529 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHC3Q92529 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC3Q92529 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC3Q92529 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.36■□□□□ 0.21
SHC3Q92529 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC3Q92529 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SHC3Q92529 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SHC3Q92529 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.36■□□□□ 0.21
SHC3Q92529 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC3Q92529 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC3Q92529 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC3Q92529 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHC3Q92529 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC3Q92529 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC3Q92529 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC3Q92529 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.36■□□□□ 0.21
SHC3Q92529 AC134915.1-201ENST00000426461 574 ntBASIC16.36■□□□□ 0.21
SHC3Q92529 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.36■□□□□ 0.21
SHC3Q92529 AC104596.2-201ENST00000512793 793 ntBASIC16.36■□□□□ 0.21
SHC3Q92529 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHC3Q92529 AC123567.1-201ENST00000548294 1261 ntBASIC16.36■□□□□ 0.21
SHC3Q92529 RN7SL204P-201ENST00000582831 262 ntBASIC16.36■□□□□ 0.21
SHC3Q92529 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.36■□□□□ 0.21
SHC3Q92529 LINC02560-201ENST00000596379 459 ntBASIC16.36■□□□□ 0.21
SHC3Q92529 CHCHD2P3-201ENST00000603038 451 ntBASIC16.36■□□□□ 0.21
SHC3Q92529 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.36■□□□□ 0.21
SHC3Q92529 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms