Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 AL162726.2-201ENST00000438986 1017 ntBASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 AC120045.2-201ENST00000567334 178 ntBASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 CU634019.7-201ENST00000624153 1185 ntBASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 FP236241.2-201ENST00000624906 1185 ntBASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 AP002414.2-201ENST00000591780 3365 ntBASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 C1QBPP1-201ENST00000400117 770 ntBASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 SOCS2P1-201ENST00000417727 557 ntBASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 AC007389.4-201ENST00000454674 793 ntBASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 AC124283.3-201ENST00000570869 594 ntBASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 AC010319.3-201ENST00000597028 470 ntBASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.9□□□□□ -0.18
FNDC9Q8TBE3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
FNDC9Q8TBE3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
FNDC9Q8TBE3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.9□□□□□ -0.19
FNDC9Q8TBE3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
FNDC9Q8TBE3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
FNDC9Q8TBE3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms