Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 AL365209.1-201ENST00000624418 6473 ntBASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 AC124283.3-201ENST00000570869 594 ntBASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 SAMD11P1-201ENST00000571429 661 ntBASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 AC133539.2-201ENST00000604757 467 ntBASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC148Q8NFR7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 AL359711.2-201ENST00000563105 872 ntBASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 CTBP2P3-201ENST00000585629 1255 ntBASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 AL138799.1-201ENST00000448213 1675 ntBASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 AC006058.4-201ENST00000624016 1670 ntBASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC148Q8NFR7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 AC006486.2-201ENST00000624246 2199 ntBASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC148Q8NFR7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms