Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 AC005229.1-201ENST00000392885 409 ntBASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 AL355864.2-201ENST00000447420 863 ntBASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 AC104640.1-201ENST00000562617 2109 ntBASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 AP000845.1-201ENST00000581677 2131 ntBASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 HLA-K-203ENST00000430151 1046 ntBASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 AC106886.1-201ENST00000568660 600 ntBASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 AL022328.1-201ENST00000610050 478 ntBASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAM1L1Q8N609 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 AC023157.3-201ENST00000619086 2088 ntBASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms