Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
TRIM42Q8IWZ5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
TRIM42Q8IWZ5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.06
TRIM42Q8IWZ5 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM42Q8IWZ5 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM42Q8IWZ5 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM42Q8IWZ5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 BEND3P1-201ENST00000421591 1944 ntBASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 AC002056.1-201ENST00000395613 760 ntBASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 AC136604.1-201ENST00000418535 575 ntBASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 GHSR-202ENST00000427970 912 ntBASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 KRT18P2-201ENST00000447938 1258 ntBASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 AC023511.2-201ENST00000618803 211 ntBASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM42Q8IWZ5 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 AC025580.3-201ENST00000617932 1424 ntBASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 FAM220BP-201ENST00000377689 816 ntBASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 AL138918.1-201ENST00000568306 659 ntBASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms