Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 BX842568.4-201ENST00000421222 227 ntBASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 AC023141.5-201ENST00000458585 616 ntBASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 AC009093.7-201ENST00000623853 1223 ntBASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 AL035456.1-201ENST00000456064 1369 ntBASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 DKFZP434A062-201ENST00000573103 5021 ntBASIC16.35■□□□□ 0.21
CCDC50Q8IVM0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 AC232323.1-201ENST00000540724 2099 ntBASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 REXO1L5P-201ENST00000622260 2098 ntBASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 CICP23-201ENST00000605013 2741 ntBASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 SPDYE17-201ENST00000412399 783 ntBASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 AC112482.1-201ENST00000492080 688 ntBASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 MIR4453-201ENST00000584019 89 ntBASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 AL133215.2-201ENST00000609242 977 ntBASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC50Q8IVM0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC50Q8IVM0 CICP11-201ENST00000434745 2827 ntBASIC16.33■□□□□ 0.21
CCDC50Q8IVM0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CCDC50Q8IVM0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CCDC50Q8IVM0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC50Q8IVM0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
CCDC50Q8IVM0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC50Q8IVM0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC50Q8IVM0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC50Q8IVM0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms