Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CROCCP3Q8IVE0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.02□□□□□ -0.16
CROCCP3Q8IVE0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 AL645939.2-201ENST00000427340 991 ntBASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 AC092329.2-201ENST00000598402 547 ntBASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 AL805961.1-202ENST00000641562 540 ntBASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CROCCP3Q8IVE0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 AC012569.1-201ENST00000591191 1524 ntBASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 AP001972.5-201ENST00000624624 2338 ntBASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 MIR5100-201ENST00000579544 119 ntBASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 GGTLC5P-201ENST00000617623 998 ntBASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms