Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 MIR326-201ENST00000362220 95 ntBASIC17.11■□□□□ 0.33
TRIM50Q86XT4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 AC004066.1-201ENST00000502488 802 ntBASIC17.11■□□□□ 0.33
TRIM50Q86XT4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 AC023310.1-201ENST00000554836 735 ntBASIC17.11■□□□□ 0.33
TRIM50Q86XT4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 AC132938.4-201ENST00000623835 848 ntBASIC17.11■□□□□ 0.33
TRIM50Q86XT4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 AHCYP2-201ENST00000430630 1300 ntBASIC17.11■□□□□ 0.33
TRIM50Q86XT4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 AC105250.1-201ENST00000509378 2057 ntBASIC17.11■□□□□ 0.33
TRIM50Q86XT4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 LRRC59-203ENST00000576448 1531 ntBASIC17.11■□□□□ 0.33
TRIM50Q86XT4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM50Q86XT4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 SAMD11P1-201ENST00000571429 661 ntBASIC17.1■□□□□ 0.33
TRIM50Q86XT4 MIR6787-201ENST00000616675 61 ntBASIC17.1■□□□□ 0.33
TRIM50Q86XT4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 AC006453.4-201ENST00000636949 1252 ntBASIC17.1■□□□□ 0.33
TRIM50Q86XT4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 AC063926.3-201ENST00000624734 5658 ntBASIC17.1■□□□□ 0.33
TRIM50Q86XT4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms