Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 AC135586.1-201ENST00000539323 574 ntBASIC17.34■□□□□ 0.37
SHC4Q6S5L8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 AC097359.2-201ENST00000604992 2389 ntBASIC17.33■□□□□ 0.37
SHC4Q6S5L8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHC4Q6S5L8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHC4Q6S5L8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHC4Q6S5L8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHC4Q6S5L8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.33■□□□□ 0.37
SHC4Q6S5L8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHC4Q6S5L8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.33■□□□□ 0.37
SHC4Q6S5L8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.33■□□□□ 0.37
SHC4Q6S5L8 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHC4Q6S5L8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHC4Q6S5L8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.33■□□□□ 0.37
SHC4Q6S5L8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHC4Q6S5L8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.33■□□□□ 0.37
SHC4Q6S5L8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 MRPS18AP1-201ENST00000414458 589 ntBASIC17.33■□□□□ 0.36
SHC4Q6S5L8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC4Q6S5L8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 AC022144.1-201ENST00000602255 1580 ntBASIC17.32■□□□□ 0.36
SHC4Q6S5L8 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 DRD5P1-201ENST00000456605 1438 ntBASIC17.32■□□□□ 0.36
SHC4Q6S5L8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC4Q6S5L8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms