Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 TSSK5P-201ENST00000423978 907 ntBASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 AC114501.2-201ENST00000439631 535 ntBASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 AC009477.1-201ENST00000452936 217 ntBASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 AC092337.1-201ENST00000568699 1129 ntBASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 AL158212.4-201ENST00000624062 1286 ntBASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 AC018529.2-202ENST00000611482 3087 ntBASIC14.89□□□□□ -0.03
LETMD1Q6P1Q0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 MTHFR-210ENST00000641407 2387 ntBASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 MIR943-201ENST00000401286 94 ntBASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 SPDYE18-201ENST00000510091 1050 ntBASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 AC009407.1-201ENST00000568958 598 ntBASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.88□□□□□ -0.03
LETMD1Q6P1Q0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LETMD1Q6P1Q0 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LETMD1Q6P1Q0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LETMD1Q6P1Q0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.87□□□□□ -0.03
LETMD1Q6P1Q0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LETMD1Q6P1Q0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms