Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 AC010507.1-201ENST00000633895 436 ntBASIC12.33□□□□□ -0.44
FAM78BQ5VT40 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.33□□□□□ -0.44
FAM78BQ5VT40 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 AC140479.7-201ENST00000636301 2332 ntBASIC12.33□□□□□ -0.44
FAM78BQ5VT40 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
FAM78BQ5VT40 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 AL590627.1-203ENST00000421194 1026 ntBASIC12.32□□□□□ -0.44
FAM78BQ5VT40 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 RPL13AP23-201ENST00000480739 586 ntBASIC12.32□□□□□ -0.44
FAM78BQ5VT40 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 AC096734.2-201ENST00000562054 433 ntBASIC12.32□□□□□ -0.44
FAM78BQ5VT40 AC024267.1-201ENST00000582320 895 ntBASIC12.32□□□□□ -0.44
FAM78BQ5VT40 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 AC007064.4-201ENST00000637740 555 ntBASIC12.32□□□□□ -0.44
FAM78BQ5VT40 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
FAM78BQ5VT40 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 PEG13-201ENST00000631594 5667 ntBASIC12.31□□□□□ -0.44
FAM78BQ5VT40 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms