Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 HIST2H2BA-201ENST00000412169 381 ntBASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AC008723.1-201ENST00000506922 207 ntBASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AL109837.1-201ENST00000603272 613 ntBASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AL136295.7-201ENST00000619226 1200 ntBASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AC025271.4-201ENST00000621477 1726 ntBASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AQP7P5-201ENST00000428759 1049 ntBASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AQP7P4-201ENST00000447083 1042 ntBASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AQP7P2-201ENST00000453967 1041 ntBASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 AQP7P3-201ENST00000624547 1041 ntBASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13DQ5THJ4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC10.02□□□□□ -0.8
VPS13DQ5THJ4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC10.02□□□□□ -0.8
VPS13DQ5THJ4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC10.02□□□□□ -0.8
VPS13DQ5THJ4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
VPS13DQ5THJ4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
VPS13DQ5THJ4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
VPS13DQ5THJ4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
VPS13DQ5THJ4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.02□□□□□ -0.8
VPS13DQ5THJ4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 AL627422.1-201ENST00000434104 580 ntBASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 PGAM1P5-201ENST00000548011 764 ntBASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 LILRP1-201ENST00000444199 1370 ntBASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 LINC00528-201ENST00000600723 2160 ntBASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 SIGLEC18P-201ENST00000602271 909 ntBASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 AC007952.4-201ENST00000573866 637 ntBASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13DQ5THJ4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms