Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 AL583810.1-201ENST00000553344 1045 ntBASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 AC009090.5-201ENST00000624886 2285 ntBASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 AC092127.1-201ENST00000567093 3455 ntBASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC144BQ3MJ40 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 AC134915.1-201ENST00000426461 574 ntBASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 ENPP7P5-201ENST00000541031 1031 ntBASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC144BQ3MJ40 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 INTS4P2-202ENST00000614726 2019 ntBASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 AC124283.3-201ENST00000570869 594 ntBASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 LINC00552-201ENST00000625151 2579 ntBASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms