Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 MPI-203ENST00000535694 1523 ntTSL 2 BASIC20.01■□□□□ 0.79
COL16A1Q07092 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
COL16A1Q07092 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
COL16A1Q07092 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.01■□□□□ 0.79
COL16A1Q07092 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20■□□□□ 0.79
COL16A1Q07092 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL16A1Q07092 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
COL16A1Q07092 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
COL16A1Q07092 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20■□□□□ 0.79
COL16A1Q07092 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC20■□□□□ 0.79
COL16A1Q07092 AC018470.1-201ENST00000624790 3129 ntBASIC20■□□□□ 0.79
COL16A1Q07092 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL16A1Q07092 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL16A1Q07092 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC20■□□□□ 0.79
COL16A1Q07092 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC20■□□□□ 0.79
COL16A1Q07092 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC20■□□□□ 0.79
COL16A1Q07092 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC20■□□□□ 0.79
COL16A1Q07092 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC20■□□□□ 0.79
COL16A1Q07092 OR2A1-AS1-210ENST00000496968 531 ntBASIC20■□□□□ 0.79
COL16A1Q07092 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC20■□□□□ 0.79
COL16A1Q07092 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC20■□□□□ 0.79
COL16A1Q07092 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
COL16A1Q07092 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC20■□□□□ 0.79
COL16A1Q07092 RN7SL665P-201ENST00000578793 300 ntBASIC20■□□□□ 0.79
COL16A1Q07092 AL353622.2-201ENST00000605846 425 ntBASIC20■□□□□ 0.79
COL16A1Q07092 AC008972.2-201ENST00000606587 494 ntBASIC20■□□□□ 0.79
COL16A1Q07092 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC20■□□□□ 0.79
COL16A1Q07092 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC20■□□□□ 0.79
COL16A1Q07092 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL16A1Q07092 ILF3-AS1-201ENST00000591501 1983 ntBASIC20■□□□□ 0.79
COL16A1Q07092 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL16A1Q07092 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL16A1Q07092 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
COL16A1Q07092 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
COL16A1Q07092 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.99■□□□□ 0.79
COL16A1Q07092 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 PYY2-201ENST00000315776 282 ntBASIC19.99■□□□□ 0.79
COL16A1Q07092 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC19.99■□□□□ 0.79
COL16A1Q07092 AC073869.2-201ENST00000417338 1026 ntBASIC19.99■□□□□ 0.79
COL16A1Q07092 PTPA-215ENST00000432124 567 ntTSL 4 BASIC19.99■□□□□ 0.79
COL16A1Q07092 AC092580.1-201ENST00000433998 658 ntBASIC19.99■□□□□ 0.79
COL16A1Q07092 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
COL16A1Q07092 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC19.99■□□□□ 0.79
COL16A1Q07092 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC19.99■□□□□ 0.79
COL16A1Q07092 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC19.99■□□□□ 0.79
COL16A1Q07092 BX088702.1-201ENST00000610784 235 ntBASIC19.99■□□□□ 0.79
COL16A1Q07092 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.99■□□□□ 0.79
COL16A1Q07092 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.99■□□□□ 0.79
COL16A1Q07092 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.99■□□□□ 0.79
COL16A1Q07092 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC19.99■□□□□ 0.79
COL16A1Q07092 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.99■□□□□ 0.79
COL16A1Q07092 TNRC18P3-201ENST00000441896 2691 ntBASIC19.99■□□□□ 0.79
COL16A1Q07092 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.99■□□□□ 0.79
COL16A1Q07092 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
COL16A1Q07092 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.99■□□□□ 0.79
COL16A1Q07092 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL16A1Q07092 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
COL16A1Q07092 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
COL16A1Q07092 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL16A1Q07092 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COL16A1Q07092 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC19.98■□□□□ 0.79
COL16A1Q07092 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL16A1Q07092 OR51A9P-201ENST00000422578 911 ntBASIC19.98■□□□□ 0.79
COL16A1Q07092 AL451000.1-201ENST00000451300 1186 ntBASIC19.98■□□□□ 0.79
COL16A1Q07092 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL16A1Q07092 ALG1L3P-201ENST00000503331 765 ntBASIC19.98■□□□□ 0.79
COL16A1Q07092 OR5BD1P-201ENST00000532527 817 ntBASIC19.98■□□□□ 0.79
COL16A1Q07092 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC19.98■□□□□ 0.79
COL16A1Q07092 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC19.98■□□□□ 0.79
COL16A1Q07092 APOC1-209ENST00000592885 562 ntTSL 3 BASIC19.98■□□□□ 0.79
COL16A1Q07092 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL16A1Q07092 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL16A1Q07092 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.98■□□□□ 0.79
COL16A1Q07092 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL16A1Q07092 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.98■□□□□ 0.79
COL16A1Q07092 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.98■□□□□ 0.79
COL16A1Q07092 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL16A1Q07092 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL16A1Q07092 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL16A1Q07092 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.98■□□□□ 0.79
COL16A1Q07092 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL16A1Q07092 AL136172.1-201ENST00000598590 1394 ntBASIC19.98■□□□□ 0.79
COL16A1Q07092 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC19.98■□□□□ 0.79
COL16A1Q07092 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL16A1Q07092 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms