Protein–RNA interactions for Protein: Q00059

TFAM, Transcription factor A, mitochondrial, humanhuman

Known RBP Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFAMQ00059 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TFAMQ00059 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TFAMQ00059 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.63■□□□□ 0.25
TFAMQ00059 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TFAMQ00059 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TFAMQ00059 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.63■□□□□ 0.25
TFAMQ00059 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TFAMQ00059 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.63■□□□□ 0.25
TFAMQ00059 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TFAMQ00059 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TFAMQ00059 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TFAMQ00059 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.63■□□□□ 0.25
TFAMQ00059 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.63■□□□□ 0.25
TFAMQ00059 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.63■□□□□ 0.25
TFAMQ00059 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TFAMQ00059 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TFAMQ00059 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.63■□□□□ 0.25
TFAMQ00059 AP001063.1-201ENST00000568332 529 ntBASIC16.63■□□□□ 0.25
TFAMQ00059 SAMD11P1-201ENST00000571429 661 ntBASIC16.63■□□□□ 0.25
TFAMQ00059 MIR5189-201ENST00000577370 114 ntBASIC16.63■□□□□ 0.25
TFAMQ00059 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.63■□□□□ 0.25
TFAMQ00059 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.63■□□□□ 0.25
TFAMQ00059 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.63■□□□□ 0.25
TFAMQ00059 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TFAMQ00059 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TFAMQ00059 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TFAMQ00059 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.63■□□□□ 0.25
TFAMQ00059 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.63■□□□□ 0.25
TFAMQ00059 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TFAMQ00059 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TFAMQ00059 AC007787.1-201ENST00000588095 1583 ntBASIC16.63■□□□□ 0.25
TFAMQ00059 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
TFAMQ00059 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TFAMQ00059 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TFAMQ00059 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.63■□□□□ 0.25
TFAMQ00059 KRT8P44-201ENST00000441609 1350 ntBASIC16.63■□□□□ 0.25
TFAMQ00059 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TFAMQ00059 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
TFAMQ00059 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.62■□□□□ 0.25
TFAMQ00059 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.62■□□□□ 0.25
TFAMQ00059 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TFAMQ00059 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.62■□□□□ 0.25
TFAMQ00059 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.62■□□□□ 0.25
TFAMQ00059 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TFAMQ00059 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.62■□□□□ 0.25
TFAMQ00059 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.62■□□□□ 0.25
TFAMQ00059 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.62■□□□□ 0.25
TFAMQ00059 ACTG1P3-201ENST00000431775 1114 ntBASIC16.62■□□□□ 0.25
TFAMQ00059 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.62■□□□□ 0.25
TFAMQ00059 AC093433.1-201ENST00000458048 571 ntBASIC16.62■□□□□ 0.25
TFAMQ00059 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.62■□□□□ 0.25
TFAMQ00059 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.62■□□□□ 0.25
TFAMQ00059 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.62■□□□□ 0.25
TFAMQ00059 AC009486.1-201ENST00000569860 813 ntBASIC16.62■□□□□ 0.25
TFAMQ00059 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.62■□□□□ 0.25
TFAMQ00059 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.62■□□□□ 0.25
TFAMQ00059 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.62■□□□□ 0.25
TFAMQ00059 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.62■□□□□ 0.25
TFAMQ00059 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.62■□□□□ 0.25
TFAMQ00059 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.62■□□□□ 0.25
TFAMQ00059 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TFAMQ00059 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.62■□□□□ 0.25
TFAMQ00059 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TFAMQ00059 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TFAMQ00059 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TFAMQ00059 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TFAMQ00059 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TFAMQ00059 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TFAMQ00059 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TFAMQ00059 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.61■□□□□ 0.25
TFAMQ00059 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TFAMQ00059 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TFAMQ00059 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TFAMQ00059 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TFAMQ00059 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.61■□□□□ 0.25
TFAMQ00059 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 505.1 ms