Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.13■□□□□ 0.17
IRX4P78413 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
IRX4P78413 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IRX4P78413 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
IRX4P78413 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IRX4P78413 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IRX4P78413 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IRX4P78413 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
IRX4P78413 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IRX4P78413 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
IRX4P78413 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
IRX4P78413 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.12■□□□□ 0.17
IRX4P78413 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
IRX4P78413 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IRX4P78413 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IRX4P78413 TMEM14DP-201ENST00000422205 345 ntBASIC16.12■□□□□ 0.17
IRX4P78413 MEP1AP4-201ENST00000423244 1087 ntBASIC16.12■□□□□ 0.17
IRX4P78413 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IRX4P78413 ELK1P1-201ENST00000485699 580 ntBASIC16.12■□□□□ 0.17
IRX4P78413 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
IRX4P78413 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.12■□□□□ 0.17
IRX4P78413 AC123567.1-201ENST00000548294 1261 ntBASIC16.12■□□□□ 0.17
IRX4P78413 AC023310.3-201ENST00000557027 670 ntBASIC16.12■□□□□ 0.17
IRX4P78413 AC100756.1-201ENST00000562736 682 ntBASIC16.12■□□□□ 0.17
IRX4P78413 AP005482.1-201ENST00000563722 1273 ntBASIC16.12■□□□□ 0.17
IRX4P78413 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.12■□□□□ 0.17
IRX4P78413 AC138749.3-201ENST00000567691 622 ntBASIC16.12■□□□□ 0.17
IRX4P78413 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.12■□□□□ 0.17
IRX4P78413 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.12■□□□□ 0.17
IRX4P78413 AC116165.1-201ENST00000611806 668 ntBASIC16.12■□□□□ 0.17
IRX4P78413 MIR6775-201ENST00000617557 69 ntBASIC16.12■□□□□ 0.17
IRX4P78413 AC004461.2-201ENST00000629517 803 ntBASIC16.12■□□□□ 0.17
IRX4P78413 COX11-210ENST00000639671 696 ntBASIC16.12■□□□□ 0.17
IRX4P78413 AL033527.5-202ENST00000641632 1098 ntBASIC16.12■□□□□ 0.17
IRX4P78413 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.12■□□□□ 0.17
IRX4P78413 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.12■□□□□ 0.17
IRX4P78413 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
IRX4P78413 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.12■□□□□ 0.17
IRX4P78413 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IRX4P78413 AC023157.3-201ENST00000619086 2088 ntBASIC16.12■□□□□ 0.17
IRX4P78413 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IRX4P78413 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IRX4P78413 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IRX4P78413 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IRX4P78413 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.12■□□□□ 0.17
IRX4P78413 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IRX4P78413 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IRX4P78413 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.11■□□□□ 0.17
IRX4P78413 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IRX4P78413 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.11■□□□□ 0.17
IRX4P78413 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IRX4P78413 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.11■□□□□ 0.17
IRX4P78413 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.11■□□□□ 0.17
IRX4P78413 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IRX4P78413 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
IRX4P78413 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
IRX4P78413 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.11■□□□□ 0.17
IRX4P78413 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IRX4P78413 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.11■□□□□ 0.17
IRX4P78413 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.11■□□□□ 0.17
IRX4P78413 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IRX4P78413 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
IRX4P78413 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.11■□□□□ 0.17
IRX4P78413 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.11■□□□□ 0.17
IRX4P78413 AC234783.1-201ENST00000441761 496 ntBASIC16.11■□□□□ 0.17
IRX4P78413 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.11■□□□□ 0.17
IRX4P78413 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IRX4P78413 SERBP1P3-201ENST00000459980 809 ntBASIC16.11■□□□□ 0.17
IRX4P78413 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
IRX4P78413 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IRX4P78413 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IRX4P78413 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.11■□□□□ 0.17
IRX4P78413 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.11■□□□□ 0.17
IRX4P78413 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.11■□□□□ 0.17
IRX4P78413 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.11■□□□□ 0.17
IRX4P78413 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.11■□□□□ 0.17
IRX4P78413 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.11■□□□□ 0.17
IRX4P78413 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.11■□□□□ 0.17
IRX4P78413 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.11■□□□□ 0.17
IRX4P78413 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.11■□□□□ 0.17
IRX4P78413 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.11■□□□□ 0.17
IRX4P78413 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IRX4P78413 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
IRX4P78413 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.11■□□□□ 0.17
IRX4P78413 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.11■□□□□ 0.17
IRX4P78413 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IRX4P78413 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
IRX4P78413 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
IRX4P78413 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IRX4P78413 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IRX4P78413 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
IRX4P78413 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
IRX4P78413 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms