Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 AL645728.2-202ENST00000641679 227 ntBASIC13.78□□□□□ -0.2
ACTA1P68133 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ACTA1P68133 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.78□□□□□ -0.2
ACTA1P68133 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.78□□□□□ -0.2
ACTA1P68133 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ACTA1P68133 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ACTA1P68133 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ACTA1P68133 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.78□□□□□ -0.2
ACTA1P68133 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.78□□□□□ -0.2
ACTA1P68133 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ACTA1P68133 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
ACTA1P68133 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ACTA1P68133 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ACTA1P68133 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ACTA1P68133 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ACTA1P68133 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
ACTA1P68133 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.78□□□□□ -0.2
ACTA1P68133 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ACTA1P68133 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
ACTA1P68133 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ACTA1P68133 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ACTA1P68133 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ACTA1P68133 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.2
ACTA1P68133 AC139749.1-202ENST00000617529 3139 ntBASIC13.77□□□□□ -0.2
ACTA1P68133 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ACTA1P68133 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ACTA1P68133 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ACTA1P68133 ST20-AS1-201ENST00000560255 4223 ntBASIC13.77□□□□□ -0.2
ACTA1P68133 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
ACTA1P68133 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ACTA1P68133 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ACTA1P68133 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.77□□□□□ -0.21
ACTA1P68133 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
ACTA1P68133 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
ACTA1P68133 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.77□□□□□ -0.21
ACTA1P68133 SPDYE17-201ENST00000412399 783 ntBASIC13.77□□□□□ -0.21
ACTA1P68133 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.77□□□□□ -0.21
ACTA1P68133 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.77□□□□□ -0.21
ACTA1P68133 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 KRT18P3-201ENST00000451602 1288 ntBASIC13.77□□□□□ -0.21
ACTA1P68133 TIMM8BP1-201ENST00000452384 211 ntBASIC13.77□□□□□ -0.21
ACTA1P68133 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.77□□□□□ -0.21
ACTA1P68133 KRT8P48-201ENST00000515599 1220 ntBASIC13.77□□□□□ -0.21
ACTA1P68133 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
ACTA1P68133 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.77□□□□□ -0.21
ACTA1P68133 AC015910.1-201ENST00000579400 975 ntBASIC13.77□□□□□ -0.21
ACTA1P68133 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.77□□□□□ -0.21
ACTA1P68133 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.77□□□□□ -0.21
ACTA1P68133 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.77□□□□□ -0.21
ACTA1P68133 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.77□□□□□ -0.21
ACTA1P68133 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.77□□□□□ -0.21
ACTA1P68133 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
ACTA1P68133 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
ACTA1P68133 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
ACTA1P68133 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.77□□□□□ -0.21
ACTA1P68133 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.77□□□□□ -0.21
ACTA1P68133 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ACTA1P68133 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ACTA1P68133 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ACTA1P68133 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.76□□□□□ -0.21
ACTA1P68133 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 AC113367.3-201ENST00000508316 1912 ntBASIC13.76□□□□□ -0.21
ACTA1P68133 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
ACTA1P68133 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.76□□□□□ -0.21
ACTA1P68133 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ACTA1P68133 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
ACTA1P68133 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ACTA1P68133 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ACTA1P68133 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ACTA1P68133 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms