Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CLDN2P57739 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.15■□□□□ 0.02
CLDN2P57739 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN2P57739 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CLDN2P57739 PFN1P12-201ENST00000455938 534 ntBASIC15.15■□□□□ 0.02
CLDN2P57739 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CLDN2P57739 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN2P57739 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN2P57739 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN2P57739 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN2P57739 MIR6787-201ENST00000616675 61 ntBASIC15.15■□□□□ 0.02
CLDN2P57739 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN2P57739 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN2P57739 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN2P57739 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN2P57739 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CLDN2P57739 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN2P57739 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN2P57739 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN2P57739 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN2P57739 AC105250.1-201ENST00000509378 2057 ntBASIC15.15■□□□□ 0.02
CLDN2P57739 AL365203.3-201ENST00000609742 2057 ntBASIC15.15■□□□□ 0.02
CLDN2P57739 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN2P57739 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN2P57739 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN2P57739 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN2P57739 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN2P57739 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN2P57739 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 KRT8P44-201ENST00000441609 1350 ntBASIC15.14■□□□□ 0.01
CLDN2P57739 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CLDN2P57739 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN2P57739 AL354989.2-201ENST00000435838 1540 ntBASIC15.14■□□□□ 0.01
CLDN2P57739 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CLDN2P57739 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN2P57739 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN2P57739 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLDN2P57739 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.14■□□□□ 0.01
CLDN2P57739 AC099548.2-209ENST00000480264 625 ntBASIC15.14■□□□□ 0.01
CLDN2P57739 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 FAM86HP-204ENST00000513466 959 ntBASIC15.14■□□□□ 0.01
CLDN2P57739 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN2P57739 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CLDN2P57739 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN2P57739 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.14■□□□□ 0.01
CLDN2P57739 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.14■□□□□ 0.01
CLDN2P57739 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN2P57739 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLDN2P57739 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN2P57739 CICP11-201ENST00000434745 2827 ntBASIC15.14■□□□□ 0.01
CLDN2P57739 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLDN2P57739 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN2P57739 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN2P57739 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN2P57739 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLDN2P57739 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN2P57739 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLDN2P57739 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN2P57739 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN2P57739 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
CLDN2P57739 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms