Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.56■□□□□ 0.08
WNT3AP56704 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.56■□□□□ 0.08
WNT3AP56704 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3AP56704 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
WNT3AP56704 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3AP56704 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3AP56704 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3AP56704 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3AP56704 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
WNT3AP56704 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3AP56704 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.56■□□□□ 0.08
WNT3AP56704 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
WNT3AP56704 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3AP56704 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
WNT3AP56704 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.56■□□□□ 0.08
WNT3AP56704 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
WNT3AP56704 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
WNT3AP56704 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
WNT3AP56704 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3AP56704 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.56■□□□□ 0.08
WNT3AP56704 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
WNT3AP56704 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3AP56704 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3AP56704 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3AP56704 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.55■□□□□ 0.08
WNT3AP56704 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
WNT3AP56704 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.55■□□□□ 0.08
WNT3AP56704 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
WNT3AP56704 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
WNT3AP56704 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.55■□□□□ 0.08
WNT3AP56704 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
WNT3AP56704 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.55■□□□□ 0.08
WNT3AP56704 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 AL391825.1-201ENST00000457671 1364 ntBASIC15.55■□□□□ 0.08
WNT3AP56704 AC098850.1-201ENST00000419919 790 ntBASIC15.55■□□□□ 0.08
WNT3AP56704 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 RPL13AP25-201ENST00000484130 612 ntBASIC15.55■□□□□ 0.08
WNT3AP56704 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 AC123567.1-201ENST00000548294 1261 ntBASIC15.55■□□□□ 0.08
WNT3AP56704 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
WNT3AP56704 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.55■□□□□ 0.08
WNT3AP56704 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.55■□□□□ 0.08
WNT3AP56704 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
WNT3AP56704 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
WNT3AP56704 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
WNT3AP56704 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.54■□□□□ 0.08
WNT3AP56704 AL138799.1-201ENST00000448213 1675 ntBASIC15.54■□□□□ 0.08
WNT3AP56704 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.54■□□□□ 0.08
WNT3AP56704 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.54■□□□□ 0.08
WNT3AP56704 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
WNT3AP56704 AC007787.1-201ENST00000588095 1583 ntBASIC15.54■□□□□ 0.08
WNT3AP56704 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.54■□□□□ 0.08
WNT3AP56704 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
WNT3AP56704 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
WNT3AP56704 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
WNT3AP56704 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
WNT3AP56704 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
WNT3AP56704 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
WNT3AP56704 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
WNT3AP56704 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
WNT3AP56704 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
WNT3AP56704 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
WNT3AP56704 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
WNT3AP56704 AC087499.6-201ENST00000411576 835 ntBASIC15.54■□□□□ 0.08
WNT3AP56704 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.54■□□□□ 0.08
WNT3AP56704 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.54■□□□□ 0.08
WNT3AP56704 AL353779.1-201ENST00000434793 351 ntBASIC15.54■□□□□ 0.08
WNT3AP56704 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.54■□□□□ 0.08
WNT3AP56704 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.54■□□□□ 0.08
WNT3AP56704 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.54■□□□□ 0.08
WNT3AP56704 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.54■□□□□ 0.08
WNT3AP56704 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.54■□□□□ 0.08
WNT3AP56704 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.54■□□□□ 0.08
WNT3AP56704 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.54■□□□□ 0.08
WNT3AP56704 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.54■□□□□ 0.08
WNT3AP56704 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
WNT3AP56704 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.54■□□□□ 0.08
WNT3AP56704 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.54■□□□□ 0.08
WNT3AP56704 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
WNT3AP56704 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.54■□□□□ 0.08
WNT3AP56704 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.54■□□□□ 0.08
WNT3AP56704 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.54■□□□□ 0.08
WNT3AP56704 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms