Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.56■□□□□ 0.72
BRPF1P55201 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRPF1P55201 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
BRPF1P55201 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.56■□□□□ 0.72
BRPF1P55201 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRPF1P55201 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRPF1P55201 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRPF1P55201 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.56■□□□□ 0.72
BRPF1P55201 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRPF1P55201 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRPF1P55201 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRPF1P55201 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRPF1P55201 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRPF1P55201 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.55■□□□□ 0.72
BRPF1P55201 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRPF1P55201 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC19.55■□□□□ 0.72
BRPF1P55201 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRPF1P55201 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRPF1P55201 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
BRPF1P55201 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC19.55■□□□□ 0.72
BRPF1P55201 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
BRPF1P55201 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
BRPF1P55201 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.55■□□□□ 0.72
BRPF1P55201 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC19.55■□□□□ 0.72
BRPF1P55201 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRPF1P55201 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRPF1P55201 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.55■□□□□ 0.72
BRPF1P55201 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.55■□□□□ 0.72
BRPF1P55201 AL139094.1-201ENST00000405549 1188 ntBASIC19.55■□□□□ 0.72
BRPF1P55201 KRT8P14-201ENST00000414254 1442 ntBASIC19.55■□□□□ 0.72
BRPF1P55201 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.55■□□□□ 0.72
BRPF1P55201 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BRPF1P55201 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.55■□□□□ 0.72
BRPF1P55201 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.55■□□□□ 0.72
BRPF1P55201 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
BRPF1P55201 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19.55■□□□□ 0.72
BRPF1P55201 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.55■□□□□ 0.72
BRPF1P55201 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.55■□□□□ 0.72
BRPF1P55201 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
BRPF1P55201 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC19.55■□□□□ 0.72
BRPF1P55201 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
BRPF1P55201 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRPF1P55201 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BRPF1P55201 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRPF1P55201 LILRP1-201ENST00000444199 1370 ntBASIC19.55■□□□□ 0.72
BRPF1P55201 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRPF1P55201 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BRPF1P55201 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRPF1P55201 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
BRPF1P55201 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRPF1P55201 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
BRPF1P55201 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRPF1P55201 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRPF1P55201 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC19.54■□□□□ 0.72
BRPF1P55201 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BRPF1P55201 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
BRPF1P55201 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
BRPF1P55201 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
BRPF1P55201 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRPF1P55201 AC092506.1-202ENST00000401022 528 ntBASIC19.54■□□□□ 0.72
BRPF1P55201 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.54■□□□□ 0.72
BRPF1P55201 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.54■□□□□ 0.72
BRPF1P55201 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.54■□□□□ 0.72
BRPF1P55201 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BRPF1P55201 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.54■□□□□ 0.72
BRPF1P55201 MIR6775-201ENST00000617557 69 ntBASIC19.54■□□□□ 0.72
BRPF1P55201 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BRPF1P55201 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRPF1P55201 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
BRPF1P55201 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRPF1P55201 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
BRPF1P55201 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.54■□□□□ 0.72
BRPF1P55201 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRPF1P55201 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRPF1P55201 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRPF1P55201 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
BRPF1P55201 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRPF1P55201 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
BRPF1P55201 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRPF1P55201 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.53■□□□□ 0.72
BRPF1P55201 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC19.53■□□□□ 0.72
BRPF1P55201 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
BRPF1P55201 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRPF1P55201 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.53■□□□□ 0.72
BRPF1P55201 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRPF1P55201 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRPF1P55201 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.53■□□□□ 0.72
BRPF1P55201 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
BRPF1P55201 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.53■□□□□ 0.72
BRPF1P55201 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.53■□□□□ 0.72
BRPF1P55201 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.53■□□□□ 0.72
BRPF1P55201 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.53■□□□□ 0.72
BRPF1P55201 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.53■□□□□ 0.72
BRPF1P55201 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
BRPF1P55201 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.53■□□□□ 0.72
BRPF1P55201 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.53■□□□□ 0.72
BRPF1P55201 AP005019.2-201ENST00000615104 511 ntBASIC19.53■□□□□ 0.72
BRPF1P55201 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.53■□□□□ 0.72
BRPF1P55201 AL603764.1-201ENST00000636452 321 ntBASIC19.53■□□□□ 0.72
BRPF1P55201 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms