Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.94■□□□□ 0.3
PMS1P54277 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.94■□□□□ 0.3
PMS1P54277 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.94■□□□□ 0.3
PMS1P54277 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.94■□□□□ 0.3
PMS1P54277 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
PMS1P54277 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PMS1P54277 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.94■□□□□ 0.3
PMS1P54277 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.93■□□□□ 0.3
PMS1P54277 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
PMS1P54277 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PMS1P54277 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 BTBD7P1-201ENST00000447253 1453 ntBASIC16.93■□□□□ 0.3
PMS1P54277 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.93■□□□□ 0.3
PMS1P54277 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.93■□□□□ 0.3
PMS1P54277 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PMS1P54277 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PMS1P54277 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PMS1P54277 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.93■□□□□ 0.3
PMS1P54277 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.93■□□□□ 0.3
PMS1P54277 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.93■□□□□ 0.3
PMS1P54277 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.93■□□□□ 0.3
PMS1P54277 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.93■□□□□ 0.3
PMS1P54277 AC135586.1-201ENST00000539323 574 ntBASIC16.93■□□□□ 0.3
PMS1P54277 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.93■□□□□ 0.3
PMS1P54277 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.93■□□□□ 0.3
PMS1P54277 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.93■□□□□ 0.3
PMS1P54277 AC106028.4-201ENST00000614509 607 ntBASIC16.93■□□□□ 0.3
PMS1P54277 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
PMS1P54277 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PMS1P54277 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.93■□□□□ 0.3
PMS1P54277 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 AC022144.1-201ENST00000602255 1580 ntBASIC16.93■□□□□ 0.3
PMS1P54277 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PMS1P54277 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.93■□□□□ 0.3
PMS1P54277 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.93■□□□□ 0.3
PMS1P54277 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PMS1P54277 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.93■□□□□ 0.3
PMS1P54277 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PMS1P54277 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PMS1P54277 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PMS1P54277 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.92■□□□□ 0.3
PMS1P54277 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PMS1P54277 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.92■□□□□ 0.3
PMS1P54277 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.92■□□□□ 0.3
PMS1P54277 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.92■□□□□ 0.3
PMS1P54277 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PMS1P54277 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.92■□□□□ 0.3
PMS1P54277 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.92■□□□□ 0.3
PMS1P54277 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.92■□□□□ 0.3
PMS1P54277 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.92■□□□□ 0.3
PMS1P54277 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.92■□□□□ 0.3
PMS1P54277 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PMS1P54277 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.92■□□□□ 0.3
PMS1P54277 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.92■□□□□ 0.3
PMS1P54277 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.92■□□□□ 0.3
PMS1P54277 AC104794.3-201ENST00000566840 1248 ntBASIC16.92■□□□□ 0.3
PMS1P54277 SAMD11P1-201ENST00000571429 661 ntBASIC16.92■□□□□ 0.3
PMS1P54277 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms