Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC3P51654 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
GPC3P51654 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
GPC3P51654 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC3P51654 AL138709.1-201ENST00000614840 1693 ntBASIC16.95■□□□□ 0.3
GPC3P51654 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC3P51654 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
GPC3P51654 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 KLF2P2-201ENST00000416807 1039 ntBASIC16.95■□□□□ 0.3
GPC3P51654 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.95■□□□□ 0.3
GPC3P51654 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
GPC3P51654 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.95■□□□□ 0.3
GPC3P51654 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.95■□□□□ 0.3
GPC3P51654 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.95■□□□□ 0.3
GPC3P51654 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
GPC3P51654 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
GPC3P51654 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC3P51654 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
GPC3P51654 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.94■□□□□ 0.3
GPC3P51654 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.94■□□□□ 0.3
GPC3P51654 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.94■□□□□ 0.3
GPC3P51654 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
GPC3P51654 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GPC3P51654 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
GPC3P51654 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.94■□□□□ 0.3
GPC3P51654 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.94■□□□□ 0.3
GPC3P51654 ACTBP8-201ENST00000403258 1108 ntBASIC16.94■□□□□ 0.3
GPC3P51654 AC026954.1-201ENST00000429771 1293 ntBASIC16.94■□□□□ 0.3
GPC3P51654 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
GPC3P51654 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.94■□□□□ 0.3
GPC3P51654 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.94■□□□□ 0.3
GPC3P51654 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.94■□□□□ 0.3
GPC3P51654 AC092658.1-201ENST00000505836 891 ntBASIC16.94■□□□□ 0.3
GPC3P51654 RNA5SP412-201ENST00000516234 123 ntBASIC16.94■□□□□ 0.3
GPC3P51654 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.94■□□□□ 0.3
GPC3P51654 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.94■□□□□ 0.3
GPC3P51654 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.94■□□□□ 0.3
GPC3P51654 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
GPC3P51654 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.94■□□□□ 0.3
GPC3P51654 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
GPC3P51654 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC3P51654 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GPC3P51654 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GPC3P51654 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC3P51654 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.93■□□□□ 0.3
GPC3P51654 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC3P51654 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.93■□□□□ 0.3
GPC3P51654 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC3P51654 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GPC3P51654 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
GPC3P51654 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.93■□□□□ 0.3
GPC3P51654 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC3P51654 AC148477.4-201ENST00000613430 1793 ntBASIC16.93■□□□□ 0.3
GPC3P51654 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC3P51654 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC3P51654 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC3P51654 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC3P51654 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.93■□□□□ 0.3
GPC3P51654 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC3P51654 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GPC3P51654 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.93■□□□□ 0.3
GPC3P51654 NUS1P3-201ENST00000423502 862 ntBASIC16.93■□□□□ 0.3
GPC3P51654 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms