Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC022188.1-201ENST00000620960 1664 ntBASIC16.93■□□□□ 0.3
CDK7P50613 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK7P50613 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CDK7P50613 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CDK7P50613 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDK7P50613 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.93■□□□□ 0.3
CDK7P50613 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDK7P50613 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 AL158070.2-201ENST00000623713 1621 ntBASIC16.92■□□□□ 0.3
CDK7P50613 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDK7P50613 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CDK7P50613 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.92■□□□□ 0.3
CDK7P50613 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.92■□□□□ 0.3
CDK7P50613 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDK7P50613 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDK7P50613 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDK7P50613 HIST2H2BB-201ENST00000449108 381 ntBASIC16.92■□□□□ 0.3
CDK7P50613 LDHBP1-201ENST00000455730 1119 ntBASIC16.92■□□□□ 0.3
CDK7P50613 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.92■□□□□ 0.3
CDK7P50613 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.92■□□□□ 0.3
CDK7P50613 FTLP10-202ENST00000505798 471 ntBASIC16.92■□□□□ 0.3
CDK7P50613 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.92■□□□□ 0.3
CDK7P50613 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.92■□□□□ 0.3
CDK7P50613 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.92■□□□□ 0.3
CDK7P50613 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.92■□□□□ 0.3
CDK7P50613 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.92■□□□□ 0.3
CDK7P50613 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
CDK7P50613 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.92■□□□□ 0.3
CDK7P50613 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.92■□□□□ 0.3
CDK7P50613 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.92■□□□□ 0.3
CDK7P50613 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDK7P50613 KRT8P4-201ENST00000509735 1454 ntBASIC16.92■□□□□ 0.3
CDK7P50613 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDK7P50613 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.92■□□□□ 0.3
CDK7P50613 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK7P50613 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.92■□□□□ 0.3
CDK7P50613 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDK7P50613 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.91■□□□□ 0.3
CDK7P50613 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK7P50613 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK7P50613 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK7P50613 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.91■□□□□ 0.3
CDK7P50613 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.91■□□□□ 0.3
CDK7P50613 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.91■□□□□ 0.3
CDK7P50613 AC106820.3-201ENST00000561653 397 ntBASIC16.91■□□□□ 0.3
CDK7P50613 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.91■□□□□ 0.3
CDK7P50613 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.91■□□□□ 0.3
CDK7P50613 AL023803.2-201ENST00000620080 638 ntBASIC16.91■□□□□ 0.3
CDK7P50613 AC079336.7-201ENST00000623428 1078 ntBASIC16.91■□□□□ 0.3
CDK7P50613 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.91■□□□□ 0.3
CDK7P50613 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.91■□□□□ 0.3
CDK7P50613 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 AC007950.2-201ENST00000615045 2347 ntBASIC16.91■□□□□ 0.3
CDK7P50613 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.91■□□□□ 0.3
CDK7P50613 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
CDK7P50613 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.91■□□□□ 0.3
CDK7P50613 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK7P50613 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK7P50613 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK7P50613 AC008132.1-202ENST00000342005 1389 ntBASIC16.9■□□□□ 0.3
CDK7P50613 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDK7P50613 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK7P50613 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK7P50613 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDK7P50613 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK7P50613 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK7P50613 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms