Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CENPAP49450 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.07□□□□□ -0.16
CENPAP49450 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.07□□□□□ -0.16
CENPAP49450 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.07□□□□□ -0.16
CENPAP49450 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CENPAP49450 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.07□□□□□ -0.16
CENPAP49450 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CENPAP49450 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.07□□□□□ -0.16
CENPAP49450 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CENPAP49450 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.07□□□□□ -0.16
CENPAP49450 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.07□□□□□ -0.16
CENPAP49450 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.07□□□□□ -0.16
CENPAP49450 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.07□□□□□ -0.16
CENPAP49450 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CENPAP49450 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.07□□□□□ -0.16
CENPAP49450 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.07□□□□□ -0.16
CENPAP49450 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.07□□□□□ -0.16
CENPAP49450 AC018529.1-201ENST00000613063 361 ntBASIC14.07□□□□□ -0.16
CENPAP49450 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.07□□□□□ -0.16
CENPAP49450 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.07□□□□□ -0.16
CENPAP49450 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CENPAP49450 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
CENPAP49450 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CENPAP49450 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.07□□□□□ -0.16
CENPAP49450 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 KRT8P44-201ENST00000441609 1350 ntBASIC14.07□□□□□ -0.16
CENPAP49450 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CENPAP49450 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.06□□□□□ -0.16
CENPAP49450 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.06□□□□□ -0.16
CENPAP49450 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.06□□□□□ -0.16
CENPAP49450 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CENPAP49450 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CENPAP49450 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC14.06□□□□□ -0.16
CENPAP49450 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.06□□□□□ -0.16
CENPAP49450 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.06□□□□□ -0.16
CENPAP49450 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.06□□□□□ -0.16
CENPAP49450 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 AC004461.1-201ENST00000412461 403 ntBASIC14.06□□□□□ -0.16
CENPAP49450 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.06□□□□□ -0.16
CENPAP49450 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.06□□□□□ -0.16
CENPAP49450 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.06□□□□□ -0.16
CENPAP49450 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.06□□□□□ -0.16
CENPAP49450 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 AC105021.1-202ENST00000570572 669 ntBASIC14.06□□□□□ -0.16
CENPAP49450 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.06□□□□□ -0.16
CENPAP49450 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.06□□□□□ -0.16
CENPAP49450 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.06□□□□□ -0.16
CENPAP49450 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.06□□□□□ -0.16
CENPAP49450 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.06□□□□□ -0.16
CENPAP49450 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CENPAP49450 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
CENPAP49450 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.06□□□□□ -0.16
CENPAP49450 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.06□□□□□ -0.16
CENPAP49450 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CENPAP49450 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CENPAP49450 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.05□□□□□ -0.16
CENPAP49450 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CENPAP49450 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.05□□□□□ -0.16
CENPAP49450 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC14.05□□□□□ -0.16
CENPAP49450 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CENPAP49450 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms