Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.22□□□□□ -0.13
SLC9A3P48764 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC9A3P48764 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
SLC9A3P48764 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC9A3P48764 AC007967.4-201ENST00000614700 386 ntBASIC14.22□□□□□ -0.13
SLC9A3P48764 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC9A3P48764 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC9A3P48764 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC9A3P48764 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC9A3P48764 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC9A3P48764 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SLC9A3P48764 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SLC9A3P48764 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SLC9A3P48764 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC9A3P48764 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SLC9A3P48764 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC9A3P48764 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC9A3P48764 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC9A3P48764 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC9A3P48764 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC9A3P48764 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC9A3P48764 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC9A3P48764 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC9A3P48764 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SLC9A3P48764 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SLC9A3P48764 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SLC9A3P48764 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC9A3P48764 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC9A3P48764 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC9A3P48764 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC9A3P48764 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC9A3P48764 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC9A3P48764 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SLC9A3P48764 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC9A3P48764 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.21□□□□□ -0.13
SLC9A3P48764 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC9A3P48764 AC023024.2-201ENST00000623561 1993 ntBASIC14.21□□□□□ -0.13
SLC9A3P48764 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SLC9A3P48764 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SLC9A3P48764 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC9A3P48764 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC9A3P48764 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC9A3P48764 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.21□□□□□ -0.14
SLC9A3P48764 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SLC9A3P48764 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.21□□□□□ -0.14
SLC9A3P48764 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SLC9A3P48764 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SLC9A3P48764 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC9A3P48764 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SLC9A3P48764 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SLC9A3P48764 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SLC9A3P48764 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC9A3P48764 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC9A3P48764 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC9A3P48764 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SLC9A3P48764 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC9A3P48764 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC9A3P48764 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SLC9A3P48764 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC9A3P48764 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SLC9A3P48764 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SLC9A3P48764 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SLC9A3P48764 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC9A3P48764 AC004461.1-201ENST00000412461 403 ntBASIC14.2□□□□□ -0.14
SLC9A3P48764 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
SLC9A3P48764 FAM58DP-201ENST00000428076 619 ntBASIC14.2□□□□□ -0.14
SLC9A3P48764 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC9A3P48764 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC9A3P48764 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC9A3P48764 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC9A3P48764 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms