Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC1A6P48664 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A6P48664 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A6P48664 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC1A6P48664 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
SLC1A6P48664 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SLC1A6P48664 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC1A6P48664 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A6P48664 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.19■□□□□ 0.02
SLC1A6P48664 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC1A6P48664 TARDBPP1-201ENST00000442013 1203 ntBASIC15.19■□□□□ 0.02
SLC1A6P48664 AC009078.2-202ENST00000463353 338 ntBASIC15.19■□□□□ 0.02
SLC1A6P48664 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC1A6P48664 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SLC1A6P48664 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A6P48664 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC1A6P48664 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A6P48664 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC1A6P48664 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SLC1A6P48664 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC1A6P48664 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
SLC1A6P48664 AC012508.2-201ENST00000567613 1472 ntBASIC15.19■□□□□ 0.02
SLC1A6P48664 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A6P48664 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A6P48664 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
SLC1A6P48664 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A6P48664 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A6P48664 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC1A6P48664 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SLC1A6P48664 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
SLC1A6P48664 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SLC1A6P48664 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC1A6P48664 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 AL928921.2-201ENST00000641325 2442 ntBASIC15.18■□□□□ 0.02
SLC1A6P48664 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC1A6P48664 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC1A6P48664 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
SLC1A6P48664 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A6P48664 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
SLC1A6P48664 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A6P48664 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A6P48664 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A6P48664 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A6P48664 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.18■□□□□ 0.02
SLC1A6P48664 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC1A6P48664 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC1A6P48664 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A6P48664 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A6P48664 AC084121.4-201ENST00000641598 221 ntBASIC15.18■□□□□ 0.02
SLC1A6P48664 AF228730.8-201ENST00000642140 221 ntBASIC15.18■□□□□ 0.02
SLC1A6P48664 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC1A6P48664 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A6P48664 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC1A6P48664 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC1A6P48664 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC1A6P48664 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC1A6P48664 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC1A6P48664 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC1A6P48664 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
SLC1A6P48664 AC067750.1-201ENST00000608826 6545 ntBASIC15.18■□□□□ 0.02
SLC1A6P48664 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 ST20-AS1-201ENST00000560255 4223 ntBASIC15.18■□□□□ 0.02
SLC1A6P48664 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC1A6P48664 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A6P48664 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A6P48664 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.17■□□□□ 0.02
SLC1A6P48664 REXO1L4P-201ENST00000605109 1937 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms