Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 CICP6-201ENST00000457191 2729 ntBASIC15.55■□□□□ 0.08
XPAP23025 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XPAP23025 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XPAP23025 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.55■□□□□ 0.08
XPAP23025 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.55■□□□□ 0.08
XPAP23025 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.55■□□□□ 0.08
XPAP23025 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XPAP23025 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XPAP23025 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XPAP23025 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.55■□□□□ 0.08
XPAP23025 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XPAP23025 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
XPAP23025 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
XPAP23025 GK-202ENST00000378941 458 ntTSL 3 BASIC15.55■□□□□ 0.08
XPAP23025 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
XPAP23025 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
XPAP23025 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XPAP23025 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
XPAP23025 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
XPAP23025 AP001063.1-201ENST00000568332 529 ntBASIC15.55■□□□□ 0.08
XPAP23025 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.55■□□□□ 0.08
XPAP23025 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.55■□□□□ 0.08
XPAP23025 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.55■□□□□ 0.08
XPAP23025 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.55■□□□□ 0.08
XPAP23025 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.55■□□□□ 0.08
XPAP23025 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XPAP23025 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
XPAP23025 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XPAP23025 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
XPAP23025 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
XPAP23025 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 AL138799.1-201ENST00000448213 1675 ntBASIC15.54■□□□□ 0.08
XPAP23025 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
XPAP23025 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
XPAP23025 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
XPAP23025 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
XPAP23025 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.54■□□□□ 0.08
XPAP23025 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.54■□□□□ 0.08
XPAP23025 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.54■□□□□ 0.08
XPAP23025 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 ACTG1P3-201ENST00000431775 1114 ntBASIC15.54■□□□□ 0.08
XPAP23025 KRT43P-201ENST00000434019 910 ntBASIC15.54■□□□□ 0.08
XPAP23025 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.54■□□□□ 0.08
XPAP23025 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.54■□□□□ 0.08
XPAP23025 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.54■□□□□ 0.08
XPAP23025 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.54■□□□□ 0.08
XPAP23025 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
XPAP23025 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.54■□□□□ 0.08
XPAP23025 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.54■□□□□ 0.08
XPAP23025 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
XPAP23025 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 SBF1P1-201ENST00000444527 5631 ntBASIC15.54■□□□□ 0.08
XPAP23025 AC087481.3-201ENST00000602886 1894 ntBASIC15.54■□□□□ 0.08
XPAP23025 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.54■□□□□ 0.08
XPAP23025 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.54■□□□□ 0.08
XPAP23025 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
XPAP23025 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.54■□□□□ 0.08
XPAP23025 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.53■□□□□ 0.08
XPAP23025 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.53■□□□□ 0.08
XPAP23025 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
XPAP23025 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.53■□□□□ 0.08
XPAP23025 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.53■□□□□ 0.08
XPAP23025 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
XPAP23025 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
XPAP23025 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.53■□□□□ 0.08
XPAP23025 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.53■□□□□ 0.08
XPAP23025 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.53■□□□□ 0.08
XPAP23025 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.53■□□□□ 0.08
XPAP23025 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.53■□□□□ 0.08
XPAP23025 AL355864.2-201ENST00000447420 863 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms